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Liu, Zhanjiang (John)
Next Generation Sequencing and Whole Genome Selection in Aquaculture

1. Edition February 2011
175.- Euro
2011. 232 Pages, Hardcover
ISBN 978-0-8138-0637-2 - John Wiley & Sons




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Short description
Next Generation Sequencing and Whole Genome Selection in Aquaculture comprehensively covers the current state of research in whole genome selection and applies these discoveries to the aquaculture industry specifically. The text begins with a thorough review of Single Nucleotide Polymorphism and transitions into topics such as next generation sequencing, EST data mining, SNP quality assessment, and whole genome selection principles. Ending with a discussion of the technology's specific applications to the industry, this text will be a valuable reference for those involved in all aspects of aquaculture research.

From the contents
Preface.

List of Contributors.

Chapter 1. Genomic Variations, Marker Technologies and Their Usefulness for Genome-Based Selection (Zhanjiang Liu).

Chapter 2. Copy Number Variations (Jianguo Lu and Zhanjiang Liu).

Chapter 3. Next generation DNA Sequencing Technologies and Their Applications (Qingshu Meng and Jun Yu).

Chapter 4. Library Construction for Next Generation Sequencing (Huseyin Kucuktas and Zhanjiang Liu).

Chapter 5. SNP Discovery through de novo Deep Sequencing Using the Next Generation Sequencing (Geoff C. Waldbieser).

Chapter 6. SNP Discovery through EST Data Mining (Shaolin Wang and Zhanjiang Liu).

Chapter 7. SNP Quality Assessment (Shaolin Wang, Hong Liu, and Zhanjiang Liu).

Chapter 8. SNP Genotyping Platforms (Eric Peatman).

Chapter 9. SNP analysis with duplicated fish genomes: Differentiation of SNPs, paralogous sequence variants and multi-site variants (Cecilia Castano, Yniv Palti, and Caird Rexroad).

Chapter 10. Genomic Selection for Aquaculture: Principles and Procedures (Anna K. Sonesson).

Chapter 11. Genomic Selection in Aquaculture: Methods and Practical Considerations (Ashok Ragavendran and William M. Muir).

Chapter 12. Comparison of Index Selection, BLUP, MAS, and Whole Genome Selection (Zhenmin Bao).

Index.

Color plates appear between pages 108 and 109.

 




 

        

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